• Approximate Bayesian Inference Based on Expected Evaluations 

      Hammer, Hugo Lewi; Riegler, Michael (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-02-01)
      Approximate Bayesian computing (ABC) and Bayesian Synthetic likelihood (BSL) are two popular families of methods to evaluate the posterior distribution when the likelihood function is not available or tractable. For existing variants of ABC and BSL, the focus is usually first put on the simulation algorithm, and after that the form of the resulting approximate posterior distribution comes as a ...
    • Artificial intelligence in dry eye disease 

      Storås, Andrea Marheim; Strumke, Inga; Riegler, Michael Alexander; Grauslund, Jakob; Hammer, Hugo Lewi; Yazidi, Anis; Halvorsen, Pål; Gundersen, Kjell Gunnar; Utheim, Tor Paaske; Jackson, Catherine Joan (Journal article; Tidsskriftartikkel, 2021-11-27)
      Dry eye disease (DED) has a prevalence of between 5 and 50%, depending on the diagnostic criteria used and population under study. However, it remains one of the most underdiagnosed and undertreated conditions in ophthalmology. Many tests used in the diagnosis of DED rely on an experienced observer for image interpretation, which may be considered subjective and result in variation in diagnosis. ...
    • Artificial intelligence in the fertility clinic: status, pitfalls and possibilities 

      Riegler, Michael Alexander; Stensen, Mette Haug; Witczak, Oliwia; Andersen, Jorunn Marie; Hicks, Steven; Hammer, Hugo Lewi; Delbarre, Erwan; Halvorsen, Pål; Yazidi, Anis; Holst, Nicolai; Haugen, Trine B. (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-07-29)
      In recent years, the amount of data produced in the field of ART has increased exponentially. The diversity of data is large, ranging from videos to tabular data. At the same time, artificial intelligence (AI) is progressively used in medical practice and may become a promising tool to improve success rates with ART. AI models may compensate for the lack of objectivity in several critical procedures ...
    • The Association Between Commonly Investigated User Factors and Various Types of eHealth Use for Self-Care of Type 2 Diabetes:Case of First-Generation Immigrants From Pakistan in the Oslo Area, Norway 

      Tatara, Naoe; Hammer, Hugo Lewi; Andreassen, Hege; Mirkovic, Jelena; Kjøllesdal, Marte Karoline Råberg (Journal article; Tidsskriftartikkel; Peer reviewed, 2017)
      Background: Sociodemographic and health-related factors are often investigated for their association with the active use of electronic health (eHealth). The importance of such factors has been found to vary, depending on the purpose or means of eHealth and the target user groups. Pakistanis are one of the biggest immigrant groups in the Oslo area, Norway. Due to an especially high risk of developing ...
    • Associations Between Immigration-Related User Factors and eHealth Activities for Self-Care: Case of First-Generation Immigrants From Pakistan in the Oslo Area, Norway 

      Tatara, Naoe; Hammer, Hugo Lewi; Mirkovic, Jelena; Kjøllesdal, Marte Karoline Råberg; Andreassen, Hege Kristin (Journal article; Tidsskriftartikkel; Peer reviewed, 2019)
      <i>Background</i>: Immigrant populations are often disproportionally affected by chronic diseases, such as type 2 diabetes mellitus (T2DM). Use of information and communication technology (ICT) is one promising approach for better self-care of T2DM to mitigate the social health inequalities, if designed for a wider population. However, knowledge is scarce about immigrant populations’ diverse electronic ...
    • Automatic Unsupervised Clustering of Videos of the Intracytoplasmic Sperm Injection (ICSI) Procedure 

      Storås, Andrea; Riegler, Michael Alexander; Haugen, Trine B.; Thambawita, Vajira L B; Hicks, Steven Alexander; Hammer, Hugo Lewi; Kakulavarapu, Radhika; Halvorsen, Pål; Stensen, Mette Haug (Chapter; Bokkapittel, 2023-02-02)
      The in vitro fertilization procedure called intracytoplasmic sperm injection can be used to help fertilize an egg by injecting a single sperm cell directly into the cytoplasm of the egg. In order to evaluate, refine and improve the method in the fertility clinic, the procedure is usually observed at the clinic. Alternatively, a video of the procedure can be examined and labeled in a time-consuming ...
    • A Deep Diagnostic Framework Using Explainable Artificial Intelligence and Clustering 

      Thunold, Håvard Horgen; Riegler, Michael; Yazidi, Anis; Hammer, Hugo Lewi (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-11-09)
      An important part of diagnostics is to gain insight into properties that characterize a disease. Machine learning has been used for this purpose, for instance, to identify biomarkers in genomics. However, when patient data are presented as images, identifying properties that characterize a disease becomes far more challenging. A common strategy involves extracting features from the images and ...
    • Deep Tower Networks for Efficient Temperature Forecasting from Multiple Data Sources 

      Eide, Siri Sofie; Riegler, Michael; Hammer, Hugo Lewi; Bremnes, John Bjørnar (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-06)
      Many data related problems involve handling multiple data streams of different types at the same time. These problems are both complex and challenging, and researchers often end up using only one modality or combining them via a late fusion based approach. To tackle this challenge, we develop and investigate the usefulness of a novel deep learning method called tower networks. This method is able ...
    • Efficient quantile tracking using an oracle 

      Hammer, Hugo Lewi; Yazidi, Anis; Riegler, Michael; Rue, Håvard (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-14)
      Concept drift is a well-known issue that arises when working with data streams. In this paper, we present a procedure that allows a quantile tracking procedure to cope with concept drift. We suggest using expected quantile loss, a popular loss function in quantile regression, to monitor the quantile tracking error, which, in turn, is used to efficiently adapt to concept drift. The suggested ...
    • HTAD: A Home-Tasks Activities Dataset with Wrist-Accelerometer and Audio Features 

      Garcia-Ceja, Enrique; Thambawita, Vajira L B; Hicks, Steven; Jha, Debesh; Jakobsen, Petter; Hammer, Hugo Lewi; Halvorsen, Pål; Riegler, Michael (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-01-21)
      In this paper, we present HTAD: A Home Tasks Activities Dataset. The dataset contains wrist-accelerometer and audio data from people performing at-home tasks such as sweeping, brushing teeth, washing hands, or watching TV. These activities represent a subset of activities that are needed to be able to live independently. Being able to detect activities with wearable devices in real-time is important ...
    • HyperKvasir, a comprehensive multi-class image and video dataset for gastrointestinal endoscopy 

      Borgli, Hanna; Thambawita, Vajira; Smedsrud, Pia H; Hicks, Steven; Jha, Debesh; Eskeland, Sigrun Losada; Randel, Kristin Ranheim; Pogorelov, Konstantin; Lux, Mathias; Dang Nguyen, Duc Tien; Johansen, Dag; Griwodz, Carsten; Stensland, Håkon Kvale; Garcia-Ceja, Enrique; Schmidt, Peter T; Hammer, Hugo Lewi; Riegler, Michael; Halvorsen, Pål; de Lange, Thomas (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-08-28)
      Artificial intelligence is currently a hot topic in medicine. However, medical data is often sparse and hard to obtain due to legal restrictions and lack of medical personnel for the cumbersome and tedious process to manually label training data. These constraints make it difficult to develop systems for automatic analysis, like detecting disease or other lesions. In this respect, this article ...
    • Kvasir-Capsule, a video capsule endoscopy dataset 

      Smedsrud, Pia H; Thambawita, Vajira L B; Hicks, Steven; Gjestang, Henrik; Olsen Nedrejord, Oda; Næss, Espen; Borgli, Hanna; Jha, Debesh; Berstad, Tor Jan; Eskeland, Sigrun Losada; Lux, Mathias; Espeland, Håvard; Petlund, Andreas; Dang Nguyen, Duc Tien; Garcia, Enrique; Johansen, Dag; Schmidt, Peter Thelin; Toth, Ervin; Hammer, Hugo Lewi; de Lange, Thomas; Riegler, Michael Alexander; Halvorsen, Pål (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-05-27)
      Artificial intelligence (AI) is predicted to have profound effects on the future of video capsule endoscopy (VCE) technology. The potential lies in improving anomaly detection while reducing manual labour. Existing work demonstrates the promising benefits of AI-based computer-assisted diagnosis systems for VCE. They also show great potential for improvements to achieve even better results. Also, ...
    • ML-Peaks: Chip-seq peak detection pipeline using machine learning techniques 

      Sheshkal, Sajad Amouei; Riegler, Michael; Hammer, Hugo Lewi (Chapter; Bokkapittel, 2023-07-17)
      CHIP-Seq data is critical for identifying the locations where proteins bind to DNA, offering valuable insights into disease molecular mechanisms and potential therapeutic targets. However, identifying regions of protein binding, or peaks, in CHIP-seq data can be challenging due to limitations in peak detection methods. Current computational tools often require manual human inspection using data ...
    • Prediction of schizophrenia from activity data using hidden Markov model parameters 

      Boeker, Matthias; Hammer, Hugo Lewi; Riegler, Michael; Halvorsen, Pål; Jakobsen, Petter (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-09-27)
      In this paper, we address the problem of predicting schizophrenia based on a persons measured motor activity over time. A key challenge to achieve this is how to extract features from the activity data that can efficiently separate schizophrenia patients from healthy subjects. To achieve this, we suggest to fit time dependent hidden Markov models with and without integrated covariates and letting ...
    • Unraveling the Impact of Land Cover Changes on Climate Using Machine Learning and Explainable Artificial Intelligence 

      Kolevatova, Anastasiia; Riegler, Michael; Cherubini, Francesco; Hu, Xiangping; Hammer, Hugo Lewi (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-10-15)
      A general issue in climate science is the handling of big data and running complex and computationally heavy simulations. In this paper, we explore the potential of using machine learning (ML) to spare computational time and optimize data usage. The paper analyzes the effects of changes in land cover (LC), such as deforestation or urbanization, on local climate. Along with green house gas emission, ...